 |
Player | Position | Former Team | New Team | Transaction date | Notes | |
| 1. | Aurilia, Rich | 1B | SF | --- | --- | Free agent | |
| 2. | Huff, Aubrey | 1B | SF | --- | 3/07/13 | Announced retirement | |
| 3. | Sanchez, Freddy | 2B | SF | --- | --- | --- | |
| 4. | Scutaro, Marco | 2B | SF | SF | 12/04/12 | Three-year contract | |
| 5. | Uribe, Juan | 2B | SF | LAD | 11/30/10 | Three-year contract | |
| 6. | Molina, Bengie | C | SF | SF | 1/19/10 | One-year contract | |
| 7. | Cabrera, Melky | OF | SF | TOR | 11/19/12 | Two-year contract | |
| 8. | Nady, Xavier | OF | SF | KC | 12/14/12 | Minor league contract | |
| 9. | Banks, Josh | RP | HOU | SF | 1/17/11 | Minor league contract | |
| 10. | Bautista, Denny | RP | SF | SEA | 12/14/10 | Minor league contract | |
| 11. | Cameron, Kevin | RP | OAK | SF | 12/22/09 | Minor League contract | |
| 12. | Casilla, Santiago | RP | OAK | SF | 1/21/10 | Minor League contract | |
| 13. | Loux, Shane | RP | SF | SF | 12/09/12 | Minor league contract | |
| 14. | Matos, Osiris | RP | SF | SF | 1/21/10 | Minor League contract | |
| 15. | Mota, Guillermo | RP | SF | --- | --- | --- | |
| 16. | Johnson, Randy | SP | SF | --- | --- | Retired | |
| 17. | Lowry, Noah | SP | SF | --- | --- | Minor League free agent | |
| 18. | Penny, Brad | SP | SF | --- | --- | --- | |
| 19. | Wellemeyer, Todd | SP | SF | CHC | 1/27/11 | Minor league contract | |
| 20. | Cabrera, Orlando | SS | SF | --- | 1/18/12 | Retired | |
| 21. | Tejada, Miguel | SS | SD | SF | 12/02/10 | One-year contract | |
| 22. | Valdez, Wilson | SS | CIN | SF | 12/10/12 | Minor league contract | |
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